mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-456ji87n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:32,184 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:33,204 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:33,414 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:25,265 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:25,383 - cnv_pipe.batch.run_model - INFO - Processing cluster 686 with 196 probes
2026-06-03 05:44:26,077 - cnv_pipe.batch.run_model.cluster686 - INFO - Child process started for cluster 686 with 196 probes
2026-06-03 05:50:06,830 - cnv_pipe.batch.run_model.cluster686 - INFO - Child process finished cluster 686. Wrote cluster_686_samples.csv and cluster_686_params.csv
2026-06-03 05:50:06,833 - cnv_pipe.batch.run_model - INFO - Cluster 686 finished in 341.45 seconds. Status: SUCCESS