mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-79hfhy9o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:18,980 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:20,170 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:20,385 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:14,849 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:15,210 - cnv_pipe.batch.run_model - INFO - Processing cluster 642 with 79 probes
2026-06-03 05:44:15,723 - cnv_pipe.batch.run_model.cluster642 - INFO - Child process started for cluster 642 with 79 probes
2026-06-03 05:46:50,947 - cnv_pipe.batch.run_model.cluster642 - INFO - Child process finished cluster 642. Wrote cluster_642_samples.csv and cluster_642_params.csv
2026-06-03 05:46:50,948 - cnv_pipe.batch.run_model - INFO - Cluster 642 finished in 155.74 seconds. Status: SUCCESS