File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/ec8b5b9dc3d2412d85e61b16f41f9c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8a3t7j1s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:05,353 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:06,343 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:06,551 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:58,553 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:58,852 - cnv_pipe.batch.run_model - INFO - Processing cluster 970 with 171 probes
2026-06-03 05:45:59,314 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process started for cluster 970 with 171 probes
2026-06-03 05:50:46,182 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process finished cluster 970. Wrote cluster_970_samples.csv and cluster_970_params.csv
2026-06-03 05:50:46,184 - cnv_pipe.batch.run_model - INFO - Cluster 970 finished in 287.33 seconds. Status: SUCCESS