mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nqs5cera because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:35,429 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:36,324 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:36,501 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:21,141 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:21,382 - cnv_pipe.batch.run_model - INFO - Processing cluster 707 with 171 probes
2026-06-03 05:44:21,764 - cnv_pipe.batch.run_model.cluster707 - INFO - Child process started for cluster 707 with 171 probes
2026-06-03 05:49:34,579 - cnv_pipe.batch.run_model.cluster707 - INFO - Child process finished cluster 707. Wrote cluster_707_samples.csv and cluster_707_params.csv
2026-06-03 05:49:34,582 - cnv_pipe.batch.run_model - INFO - Cluster 707 finished in 313.20 seconds. Status: SUCCESS