mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mgvbyvwl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:28,397 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:29,513 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:29,714 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:20,911 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:21,218 - cnv_pipe.batch.run_model - INFO - Processing cluster 103 with 191 probes
2026-06-03 05:41:21,670 - cnv_pipe.batch.run_model.cluster103 - INFO - Child process started for cluster 103 with 191 probes
2026-06-03 05:46:58,136 - cnv_pipe.batch.run_model.cluster103 - INFO - Child process finished cluster 103. Wrote cluster_103_samples.csv and cluster_103_params.csv
2026-06-03 05:46:58,138 - cnv_pipe.batch.run_model - INFO - Cluster 103 finished in 336.92 seconds. Status: SUCCESS