File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/097d9da36d3341123dcf079f9ab5b6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d71gpaxs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:37,707 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:38,632 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:38,823 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:46:29,683 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:46:29,957 - cnv_pipe.batch.run_model - INFO - Processing cluster 1132 with 192 probes
2026-06-03 05:46:30,441 - cnv_pipe.batch.run_model.cluster1132 - INFO - Child process started for cluster 1132 with 192 probes
2026-06-03 05:51:37,622 - cnv_pipe.batch.run_model.cluster1132 - INFO - Child process finished cluster 1132. Wrote cluster_1132_samples.csv and cluster_1132_params.csv
2026-06-03 05:51:37,625 - cnv_pipe.batch.run_model - INFO - Cluster 1132 finished in 307.67 seconds. Status: SUCCESS