mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-totejdb5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:17,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:18,140 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:18,324 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:06,333 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:06,445 - cnv_pipe.batch.run_model - INFO - Processing cluster 652 with 164 probes
2026-06-03 05:44:07,043 - cnv_pipe.batch.run_model.cluster652 - INFO - Child process started for cluster 652 with 164 probes
2026-06-03 05:49:10,629 - cnv_pipe.batch.run_model.cluster652 - INFO - Child process finished cluster 652. Wrote cluster_652_samples.csv and cluster_652_params.csv
2026-06-03 05:49:10,633 - cnv_pipe.batch.run_model - INFO - Cluster 652 finished in 304.19 seconds. Status: SUCCESS