File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/daeffa8900b04d13ae824996c828ea/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fozrdhyg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:19,366 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:20,412 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:20,604 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:11,290 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:11,390 - cnv_pipe.batch.run_model - INFO - Processing cluster 805 with 192 probes
2026-06-03 05:45:12,053 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process started for cluster 805 with 192 probes
2026-06-03 05:50:37,626 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process finished cluster 805. Wrote cluster_805_samples.csv and cluster_805_params.csv
2026-06-03 05:50:37,628 - cnv_pipe.batch.run_model - INFO - Cluster 805 finished in 326.24 seconds. Status: SUCCESS