mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-86hx8rv1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:40,946 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:42,014 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:42,220 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:35,242 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:35,364 - cnv_pipe.batch.run_model - INFO - Processing cluster 519 with 196 probes
2026-06-03 05:43:36,056 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process started for cluster 519 with 196 probes
2026-06-03 05:49:04,008 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process finished cluster 519. Wrote cluster_519_samples.csv and cluster_519_params.csv
2026-06-03 05:49:04,011 - cnv_pipe.batch.run_model - INFO - Cluster 519 finished in 328.65 seconds. Status: SUCCESS