mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gcgjm0r5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:24,641 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:25,474 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:25,647 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:13,495 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:13,795 - cnv_pipe.batch.run_model - INFO - Processing cluster 842 with 186 probes
2026-06-03 05:45:14,261 - cnv_pipe.batch.run_model.cluster842 - INFO - Child process started for cluster 842 with 186 probes
2026-06-03 05:50:45,087 - cnv_pipe.batch.run_model.cluster842 - INFO - Child process finished cluster 842. Wrote cluster_842_samples.csv and cluster_842_params.csv
2026-06-03 05:50:45,090 - cnv_pipe.batch.run_model - INFO - Cluster 842 finished in 331.29 seconds. Status: SUCCESS