mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1m7b038b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:34,697 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:35,626 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:35,806 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:26,064 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:26,390 - cnv_pipe.batch.run_model - INFO - Processing cluster 512 with 191 probes
2026-06-03 05:43:26,883 - cnv_pipe.batch.run_model.cluster512 - INFO - Child process started for cluster 512 with 191 probes
2026-06-03 05:49:03,500 - cnv_pipe.batch.run_model.cluster512 - INFO - Child process finished cluster 512. Wrote cluster_512_samples.csv and cluster_512_params.csv
2026-06-03 05:49:03,503 - cnv_pipe.batch.run_model - INFO - Cluster 512 finished in 337.11 seconds. Status: SUCCESS