mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6j4lxepg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:09,277 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:10,463 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:10,675 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:57,827 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:58,030 - cnv_pipe.batch.run_model - INFO - Processing cluster 593 with 178 probes
2026-06-03 05:43:58,407 - cnv_pipe.batch.run_model.cluster593 - INFO - Child process started for cluster 593 with 178 probes
2026-06-03 05:49:02,529 - cnv_pipe.batch.run_model.cluster593 - INFO - Child process finished cluster 593. Wrote cluster_593_samples.csv and cluster_593_params.csv
2026-06-03 05:49:02,533 - cnv_pipe.batch.run_model - INFO - Cluster 593 finished in 304.50 seconds. Status: SUCCESS