mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r581cj51 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:57,384 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:58,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:58,792 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:46,277 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:46,370 - cnv_pipe.batch.run_model - INFO - Processing cluster 559 with 97 probes
2026-06-03 05:43:46,863 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process started for cluster 559 with 97 probes
2026-06-03 05:46:32,842 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process finished cluster 559. Wrote cluster_559_samples.csv and cluster_559_params.csv
2026-06-03 05:46:32,843 - cnv_pipe.batch.run_model - INFO - Cluster 559 finished in 166.47 seconds. Status: SUCCESS