mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gikd3eag because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:24,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:25,390 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:25,595 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:16,560 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:16,891 - cnv_pipe.batch.run_model - INFO - Processing cluster 85 with 190 probes
2026-06-03 05:41:17,388 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process started for cluster 85 with 190 probes
2026-06-03 05:47:08,524 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process finished cluster 85. Wrote cluster_85_samples.csv and cluster_85_params.csv
2026-06-03 05:47:08,527 - cnv_pipe.batch.run_model - INFO - Cluster 85 finished in 351.64 seconds. Status: SUCCESS