mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_wk4q89l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:04,750 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:05,883 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:06,096 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:00,900 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:01,214 - cnv_pipe.batch.run_model - INFO - Processing cluster 581 with 195 probes
2026-06-03 05:44:01,725 - cnv_pipe.batch.run_model.cluster581 - INFO - Child process started for cluster 581 with 195 probes
2026-06-03 05:49:38,400 - cnv_pipe.batch.run_model.cluster581 - INFO - Child process finished cluster 581. Wrote cluster_581_samples.csv and cluster_581_params.csv
2026-06-03 05:49:38,403 - cnv_pipe.batch.run_model - INFO - Cluster 581 finished in 337.19 seconds. Status: SUCCESS