mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y_0jxleg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:05,835 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:06,692 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:06,866 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:49,207 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:49,441 - cnv_pipe.batch.run_model - INFO - Processing cluster 778 with 139 probes
2026-06-03 05:44:49,875 - cnv_pipe.batch.run_model.cluster778 - INFO - Child process started for cluster 778 with 139 probes
2026-06-03 05:49:21,152 - cnv_pipe.batch.run_model.cluster778 - INFO - Child process finished cluster 778. Wrote cluster_778_samples.csv and cluster_778_params.csv
2026-06-03 05:49:21,154 - cnv_pipe.batch.run_model - INFO - Cluster 778 finished in 271.71 seconds. Status: SUCCESS