mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-a9dkj0qq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:36,038 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:37,121 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:37,322 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:29,493 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:29,609 - cnv_pipe.batch.run_model - INFO - Processing cluster 703 with 178 probes
2026-06-03 05:44:30,079 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process started for cluster 703 with 178 probes
2026-06-03 05:49:40,017 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process finished cluster 703. Wrote cluster_703_samples.csv and cluster_703_params.csv
2026-06-03 05:49:40,020 - cnv_pipe.batch.run_model - INFO - Cluster 703 finished in 310.41 seconds. Status: SUCCESS