mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6l282tp8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:29,069 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:30,030 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:30,216 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:13,923 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:14,013 - cnv_pipe.batch.run_model - INFO - Processing cluster 684 with 169 probes
2026-06-03 05:44:14,523 - cnv_pipe.batch.run_model.cluster684 - INFO - Child process started for cluster 684 with 169 probes
2026-06-03 05:49:21,763 - cnv_pipe.batch.run_model.cluster684 - INFO - Child process finished cluster 684. Wrote cluster_684_samples.csv and cluster_684_params.csv
2026-06-03 05:49:21,767 - cnv_pipe.batch.run_model - INFO - Cluster 684 finished in 307.75 seconds. Status: SUCCESS