mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ukn6ghy3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:05,466 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:06,343 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:06,519 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:50,744 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:51,028 - cnv_pipe.batch.run_model - INFO - Processing cluster 589 with 183 probes
2026-06-03 05:43:51,453 - cnv_pipe.batch.run_model.cluster589 - INFO - Child process started for cluster 589 with 183 probes
2026-06-03 05:49:27,861 - cnv_pipe.batch.run_model.cluster589 - INFO - Child process finished cluster 589. Wrote cluster_589_samples.csv and cluster_589_params.csv
2026-06-03 05:49:27,863 - cnv_pipe.batch.run_model - INFO - Cluster 589 finished in 336.84 seconds. Status: SUCCESS