mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7j9ovedz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:41:42,940 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:41:44,157 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:41:44,374 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:42:35,401 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:42:35,650 - cnv_pipe.batch.run_model - INFO - Processing cluster 348 with 180 probes
2026-06-03 05:42:36,038 - cnv_pipe.batch.run_model.cluster348 - INFO - Child process started for cluster 348 with 180 probes
2026-06-03 05:47:59,804 - cnv_pipe.batch.run_model.cluster348 - INFO - Child process finished cluster 348. Wrote cluster_348_samples.csv and cluster_348_params.csv
2026-06-03 05:47:59,808 - cnv_pipe.batch.run_model - INFO - Cluster 348 finished in 324.16 seconds. Status: SUCCESS