mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zydlyblm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:50,737 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:51,852 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:52,058 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:45,471 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:45,764 - cnv_pipe.batch.run_model - INFO - Processing cluster 931 with 123 probes
2026-06-03 05:45:46,213 - cnv_pipe.batch.run_model.cluster931 - INFO - Child process started for cluster 931 with 123 probes
2026-06-03 05:49:15,588 - cnv_pipe.batch.run_model.cluster931 - INFO - Child process finished cluster 931. Wrote cluster_931_samples.csv and cluster_931_params.csv
2026-06-03 05:49:15,589 - cnv_pipe.batch.run_model - INFO - Cluster 931 finished in 209.82 seconds. Status: SUCCESS