mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9bx0fa41 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:27,297 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:28,339 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:28,546 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:21,686 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:21,995 - cnv_pipe.batch.run_model - INFO - Processing cluster 97 with 167 probes
2026-06-03 05:41:22,493 - cnv_pipe.batch.run_model.cluster97 - INFO - Child process started for cluster 97 with 167 probes
2026-06-03 05:46:42,926 - cnv_pipe.batch.run_model.cluster97 - INFO - Child process finished cluster 97. Wrote cluster_97_samples.csv and cluster_97_params.csv
2026-06-03 05:46:42,929 - cnv_pipe.batch.run_model - INFO - Cluster 97 finished in 320.93 seconds. Status: SUCCESS