File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/d699a7d0ec9680518a06987483d155/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l9_tb7mj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:08,234 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:09,098 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:09,309 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:52,881 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:53,139 - cnv_pipe.batch.run_model - INFO - Processing cluster 1013 with 175 probes
2026-06-03 05:45:53,518 - cnv_pipe.batch.run_model.cluster1013 - INFO - Child process started for cluster 1013 with 175 probes
2026-06-03 05:51:11,580 - cnv_pipe.batch.run_model.cluster1013 - INFO - Child process finished cluster 1013. Wrote cluster_1013_samples.csv and cluster_1013_params.csv
2026-06-03 05:51:11,583 - cnv_pipe.batch.run_model - INFO - Cluster 1013 finished in 318.44 seconds. Status: SUCCESS