mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7f5nqyzf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:27,689 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:28,660 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:28,862 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:22,687 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:23,037 - cnv_pipe.batch.run_model - INFO - Processing cluster 680 with 129 probes
2026-06-03 05:44:23,524 - cnv_pipe.batch.run_model.cluster680 - INFO - Child process started for cluster 680 with 129 probes
2026-06-03 05:48:25,446 - cnv_pipe.batch.run_model.cluster680 - INFO - Child process finished cluster 680. Wrote cluster_680_samples.csv and cluster_680_params.csv
2026-06-03 05:48:25,447 - cnv_pipe.batch.run_model - INFO - Cluster 680 finished in 242.41 seconds. Status: SUCCESS