mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6uhr8fto because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:10,240 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:11,288 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:11,490 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:02,130 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:02,396 - cnv_pipe.batch.run_model - INFO - Processing cluster 41 with 196 probes
2026-06-03 05:41:02,876 - cnv_pipe.batch.run_model.cluster41 - INFO - Child process started for cluster 41 with 196 probes
2026-06-03 05:46:43,473 - cnv_pipe.batch.run_model.cluster41 - INFO - Child process finished cluster 41. Wrote cluster_41_samples.csv and cluster_41_params.csv
2026-06-03 05:46:43,475 - cnv_pipe.batch.run_model - INFO - Cluster 41 finished in 341.08 seconds. Status: SUCCESS