mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-itnn5yrf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:11,341 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:12,459 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:12,666 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:06,883 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:07,149 - cnv_pipe.batch.run_model - INFO - Processing cluster 598 with 194 probes
2026-06-03 05:44:07,606 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process started for cluster 598 with 194 probes
2026-06-03 05:49:39,413 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process finished cluster 598. Wrote cluster_598_samples.csv and cluster_598_params.csv
2026-06-03 05:49:39,415 - cnv_pipe.batch.run_model - INFO - Cluster 598 finished in 332.27 seconds. Status: SUCCESS