mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_tnrsyg4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:44,669 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:46,595 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:46,957 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:12,024 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:12,388 - cnv_pipe.batch.run_model - INFO - Processing cluster 697 with 170 probes
2026-06-03 05:45:13,198 - cnv_pipe.batch.run_model.cluster697 - INFO - Child process started for cluster 697 with 170 probes
2026-06-03 05:51:58,214 - cnv_pipe.batch.run_model.cluster697 - INFO - Child process finished cluster 697. Wrote cluster_697_samples.csv and cluster_697_params.csv
2026-06-03 05:51:58,217 - cnv_pipe.batch.run_model - INFO - Cluster 697 finished in 405.83 seconds. Status: SUCCESS