mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kvwl9_0p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:24,809 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:25,981 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:26,181 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:18,922 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:19,217 - cnv_pipe.batch.run_model - INFO - Processing cluster 668 with 192 probes
2026-06-03 05:44:19,714 - cnv_pipe.batch.run_model.cluster668 - INFO - Child process started for cluster 668 with 192 probes
2026-06-03 05:49:34,527 - cnv_pipe.batch.run_model.cluster668 - INFO - Child process finished cluster 668. Wrote cluster_668_samples.csv and cluster_668_params.csv
2026-06-03 05:49:34,529 - cnv_pipe.batch.run_model - INFO - Cluster 668 finished in 315.31 seconds. Status: SUCCESS