mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7bcjloaf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:22,979 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:24,233 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:24,513 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:30,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:30,635 - cnv_pipe.batch.run_model - INFO - Processing cluster 39 with 191 probes
2026-06-03 05:41:31,271 - cnv_pipe.batch.run_model.cluster39 - INFO - Child process started for cluster 39 with 191 probes
2026-06-03 05:50:59,182 - cnv_pipe.batch.run_model.cluster39 - INFO - Child process finished cluster 39. Wrote cluster_39_samples.csv and cluster_39_params.csv
2026-06-03 05:50:59,186 - cnv_pipe.batch.run_model - INFO - Cluster 39 finished in 568.55 seconds. Status: SUCCESS