mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-34kbfq1z because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:17,275 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:18,336 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:18,556 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:10,948 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:11,287 - cnv_pipe.batch.run_model - INFO - Processing cluster 66 with 83 probes
2026-06-03 05:41:11,780 - cnv_pipe.batch.run_model.cluster66 - INFO - Child process started for cluster 66 with 83 probes
2026-06-03 05:44:16,741 - cnv_pipe.batch.run_model.cluster66 - INFO - Child process finished cluster 66. Wrote cluster_66_samples.csv and cluster_66_params.csv
2026-06-03 05:44:16,742 - cnv_pipe.batch.run_model - INFO - Cluster 66 finished in 185.46 seconds. Status: SUCCESS