File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/9312d6bcc8e44f051c8ddc5295b3a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eteo10nq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:51,140 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:52,226 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:52,463 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:47,343 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:47,473 - cnv_pipe.batch.run_model - INFO - Processing cluster 933 with 198 probes
2026-06-03 05:45:47,989 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process started for cluster 933 with 198 probes
2026-06-03 05:50:50,799 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process finished cluster 933. Wrote cluster_933_samples.csv and cluster_933_params.csv
2026-06-03 05:50:50,802 - cnv_pipe.batch.run_model - INFO - Cluster 933 finished in 303.33 seconds. Status: SUCCESS