File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/af3c4ed1b152c7a3528ea9beaadf5e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4xqa8vng because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:41,907 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:42,907 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:43,109 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:46:33,048 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:46:33,343 - cnv_pipe.batch.run_model - INFO - Processing cluster 1150 with 200 probes
2026-06-03 05:46:33,817 - cnv_pipe.batch.run_model.cluster1150 - INFO - Child process started for cluster 1150 with 200 probes
2026-06-03 05:51:36,295 - cnv_pipe.batch.run_model.cluster1150 - INFO - Child process finished cluster 1150. Wrote cluster_1150_samples.csv and cluster_1150_params.csv
2026-06-03 05:51:36,298 - cnv_pipe.batch.run_model - INFO - Cluster 1150 finished in 302.96 seconds. Status: SUCCESS