mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bkk56jgt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:06,221 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:07,363 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:07,558 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:55,032 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:55,269 - cnv_pipe.batch.run_model - INFO - Processing cluster 585 with 191 probes
2026-06-03 05:43:55,647 - cnv_pipe.batch.run_model.cluster585 - INFO - Child process started for cluster 585 with 191 probes
2026-06-03 05:49:29,354 - cnv_pipe.batch.run_model.cluster585 - INFO - Child process finished cluster 585. Wrote cluster_585_samples.csv and cluster_585_params.csv
2026-06-03 05:49:29,358 - cnv_pipe.batch.run_model - INFO - Cluster 585 finished in 334.09 seconds. Status: SUCCESS