mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h76yvatu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:18,331 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:19,447 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:19,666 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:15,141 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:15,441 - cnv_pipe.batch.run_model - INFO - Processing cluster 641 with 194 probes
2026-06-03 05:44:15,932 - cnv_pipe.batch.run_model.cluster641 - INFO - Child process started for cluster 641 with 194 probes
2026-06-03 05:49:40,490 - cnv_pipe.batch.run_model.cluster641 - INFO - Child process finished cluster 641. Wrote cluster_641_samples.csv and cluster_641_params.csv
2026-06-03 05:49:40,493 - cnv_pipe.batch.run_model - INFO - Cluster 641 finished in 325.05 seconds. Status: SUCCESS