mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rzuxin3p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:19,022 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:20,097 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:20,308 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:12,691 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:13,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 75 with 200 probes
2026-06-03 05:41:13,501 - cnv_pipe.batch.run_model.cluster75 - INFO - Child process started for cluster 75 with 200 probes
2026-06-03 05:46:57,741 - cnv_pipe.batch.run_model.cluster75 - INFO - Child process finished cluster 75. Wrote cluster_75_samples.csv and cluster_75_params.csv
2026-06-03 05:46:57,745 - cnv_pipe.batch.run_model - INFO - Cluster 75 finished in 344.73 seconds. Status: SUCCESS