mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3h1dbuhw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:18,615 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:19,759 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:19,966 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:11,642 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:11,967 - cnv_pipe.batch.run_model - INFO - Processing cluster 71 with 169 probes
2026-06-03 05:41:12,494 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process started for cluster 71 with 169 probes
2026-06-03 05:46:19,067 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process finished cluster 71. Wrote cluster_71_samples.csv and cluster_71_params.csv
2026-06-03 05:46:19,069 - cnv_pipe.batch.run_model - INFO - Cluster 71 finished in 307.10 seconds. Status: SUCCESS