mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wfaaceld because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:27,465 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:28,511 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:28,721 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:20,981 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:21,309 - cnv_pipe.batch.run_model - INFO - Processing cluster 678 with 188 probes
2026-06-03 05:44:21,783 - cnv_pipe.batch.run_model.cluster678 - INFO - Child process started for cluster 678 with 188 probes
2026-06-03 05:49:42,766 - cnv_pipe.batch.run_model.cluster678 - INFO - Child process finished cluster 678. Wrote cluster_678_samples.csv and cluster_678_params.csv
2026-06-03 05:49:42,768 - cnv_pipe.batch.run_model - INFO - Cluster 678 finished in 321.46 seconds. Status: SUCCESS