mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fvpwlj5h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:43,000 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:43,986 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:44,181 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:35,558 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:35,862 - cnv_pipe.batch.run_model - INFO - Processing cluster 529 with 200 probes
2026-06-03 05:43:36,338 - cnv_pipe.batch.run_model.cluster529 - INFO - Child process started for cluster 529 with 200 probes
2026-06-03 05:49:26,606 - cnv_pipe.batch.run_model.cluster529 - INFO - Child process finished cluster 529. Wrote cluster_529_samples.csv and cluster_529_params.csv
2026-06-03 05:49:26,609 - cnv_pipe.batch.run_model - INFO - Cluster 529 finished in 350.75 seconds. Status: SUCCESS