mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2tiugiwv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:45,318 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:46,593 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:46,876 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:51,332 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:51,648 - cnv_pipe.batch.run_model - INFO - Processing cluster 117 with 195 probes
2026-06-03 05:41:52,277 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process started for cluster 117 with 195 probes
2026-06-03 05:51:20,917 - cnv_pipe.batch.run_model.cluster117 - INFO - Child process finished cluster 117. Wrote cluster_117_samples.csv and cluster_117_params.csv
2026-06-03 05:51:20,921 - cnv_pipe.batch.run_model - INFO - Cluster 117 finished in 569.27 seconds. Status: SUCCESS