mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mbqywq6b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:13,881 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:15,327 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:15,587 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:24,213 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:24,372 - cnv_pipe.batch.run_model - INFO - Processing cluster 47 with 165 probes
2026-06-03 05:41:25,184 - cnv_pipe.batch.run_model.cluster47 - INFO - Child process started for cluster 47 with 165 probes
2026-06-03 05:48:03,120 - cnv_pipe.batch.run_model.cluster47 - INFO - Child process finished cluster 47. Wrote cluster_47_samples.csv and cluster_47_params.csv
2026-06-03 05:48:03,123 - cnv_pipe.batch.run_model - INFO - Cluster 47 finished in 398.75 seconds. Status: SUCCESS