mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d3k6pab_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:53,664 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:54,885 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:55,108 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:40,099 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:40,353 - cnv_pipe.batch.run_model - INFO - Processing cluster 552 with 177 probes
2026-06-03 05:43:40,769 - cnv_pipe.batch.run_model.cluster552 - INFO - Child process started for cluster 552 with 177 probes
2026-06-03 05:49:06,666 - cnv_pipe.batch.run_model.cluster552 - INFO - Child process finished cluster 552. Wrote cluster_552_samples.csv and cluster_552_params.csv
2026-06-03 05:49:06,670 - cnv_pipe.batch.run_model - INFO - Cluster 552 finished in 326.32 seconds. Status: SUCCESS