mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jhh_z3dy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:28,694 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:29,724 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:29,922 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:45:19,419 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:45:19,689 - cnv_pipe.batch.run_model - INFO - Processing cluster 853 with 192 probes
2026-06-03 05:45:20,116 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process started for cluster 853 with 192 probes
2026-06-03 05:50:32,401 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process finished cluster 853. Wrote cluster_853_samples.csv and cluster_853_params.csv
2026-06-03 05:50:32,404 - cnv_pipe.batch.run_model - INFO - Cluster 853 finished in 312.72 seconds. Status: SUCCESS