File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/cb61ddd0080f27beed98e27bc43f27/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-56r3y89g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:24,374 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:25,341 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:25,521 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:46:13,830 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:46:14,082 - cnv_pipe.batch.run_model - INFO - Processing cluster 1074 with 194 probes
2026-06-03 05:46:14,522 - cnv_pipe.batch.run_model.cluster1074 - INFO - Child process started for cluster 1074 with 194 probes
2026-06-03 05:51:25,295 - cnv_pipe.batch.run_model.cluster1074 - INFO - Child process finished cluster 1074. Wrote cluster_1074_samples.csv and cluster_1074_params.csv
2026-06-03 05:51:25,298 - cnv_pipe.batch.run_model - INFO - Cluster 1074 finished in 311.22 seconds. Status: SUCCESS