mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ml_ov1zg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:06,538 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:07,411 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:07,585 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:55,136 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:55,243 - cnv_pipe.batch.run_model - INFO - Processing cluster 594 with 188 probes
2026-06-03 05:43:55,829 - cnv_pipe.batch.run_model.cluster594 - INFO - Child process started for cluster 594 with 188 probes
2026-06-03 05:49:37,866 - cnv_pipe.batch.run_model.cluster594 - INFO - Child process finished cluster 594. Wrote cluster_594_samples.csv and cluster_594_params.csv
2026-06-03 05:49:37,868 - cnv_pipe.batch.run_model - INFO - Cluster 594 finished in 342.62 seconds. Status: SUCCESS