mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fzgx7509 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:41:56,119 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:41:57,277 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:41:57,480 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:42:48,243 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:42:48,359 - cnv_pipe.batch.run_model - INFO - Processing cluster 400 with 196 probes
2026-06-03 05:42:48,994 - cnv_pipe.batch.run_model.cluster400 - INFO - Child process started for cluster 400 with 196 probes
2026-06-03 05:48:29,835 - cnv_pipe.batch.run_model.cluster400 - INFO - Child process finished cluster 400. Wrote cluster_400_samples.csv and cluster_400_params.csv
2026-06-03 05:48:29,837 - cnv_pipe.batch.run_model - INFO - Cluster 400 finished in 341.48 seconds. Status: SUCCESS