mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lkxd3spg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:41:59,951 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:01,057 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:01,280 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:42:52,228 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:42:52,490 - cnv_pipe.batch.run_model - INFO - Processing cluster 412 with 153 probes
2026-06-03 05:42:52,939 - cnv_pipe.batch.run_model.cluster412 - INFO - Child process started for cluster 412 with 153 probes
2026-06-03 05:47:32,382 - cnv_pipe.batch.run_model.cluster412 - INFO - Child process finished cluster 412. Wrote cluster_412_samples.csv and cluster_412_params.csv
2026-06-03 05:47:32,384 - cnv_pipe.batch.run_model - INFO - Cluster 412 finished in 279.89 seconds. Status: SUCCESS