mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xhijrwat because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:43:36,563 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:43:37,619 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:43:37,821 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:29,831 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:30,125 - cnv_pipe.batch.run_model - INFO - Processing cluster 706 with 191 probes
2026-06-03 05:44:30,603 - cnv_pipe.batch.run_model.cluster706 - INFO - Child process started for cluster 706 with 191 probes
2026-06-03 05:49:52,292 - cnv_pipe.batch.run_model.cluster706 - INFO - Child process finished cluster 706. Wrote cluster_706_samples.csv and cluster_706_params.csv
2026-06-03 05:49:52,294 - cnv_pipe.batch.run_model - INFO - Cluster 706 finished in 322.17 seconds. Status: SUCCESS