mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ejbdlr4r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:09,222 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:11,534 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:11,978 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:42,056 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:42,479 - cnv_pipe.batch.run_model - INFO - Processing cluster 407 with 199 probes
2026-06-03 05:43:43,261 - cnv_pipe.batch.run_model.cluster407 - INFO - Child process started for cluster 407 with 199 probes
2026-06-03 05:51:58,648 - cnv_pipe.batch.run_model.cluster407 - INFO - Child process finished cluster 407. Wrote cluster_407_samples.csv and cluster_407_params.csv
2026-06-03 05:51:58,653 - cnv_pipe.batch.run_model - INFO - Cluster 407 finished in 496.17 seconds. Status: SUCCESS