mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-53oz0tmg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:27,303 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:28,404 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:28,634 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:21,176 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:21,480 - cnv_pipe.batch.run_model - INFO - Processing cluster 483 with 162 probes
2026-06-03 05:43:21,950 - cnv_pipe.batch.run_model.cluster483 - INFO - Child process started for cluster 483 with 162 probes
2026-06-03 05:48:17,598 - cnv_pipe.batch.run_model.cluster483 - INFO - Child process finished cluster 483. Wrote cluster_483_samples.csv and cluster_483_params.csv
2026-06-03 05:48:17,600 - cnv_pipe.batch.run_model - INFO - Cluster 483 finished in 296.12 seconds. Status: SUCCESS