mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6z7k9x1k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:50,939 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:51,841 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:52,022 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:37,729 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:37,966 - cnv_pipe.batch.run_model - INFO - Processing cluster 550 with 147 probes
2026-06-03 05:43:38,349 - cnv_pipe.batch.run_model.cluster550 - INFO - Child process started for cluster 550 with 147 probes
2026-06-03 05:48:36,881 - cnv_pipe.batch.run_model.cluster550 - INFO - Child process finished cluster 550. Wrote cluster_550_samples.csv and cluster_550_params.csv
2026-06-03 05:48:36,884 - cnv_pipe.batch.run_model - INFO - Cluster 550 finished in 298.92 seconds. Status: SUCCESS